The lack of research funding or a suitable job offer forced me to abandon my academic career. You are still very welcome to build on my research results.
The interfaces of mathematical (esp. probabilistic) modelling, stochastic processes, statistics, machine learning, chemical reaction kinetics, systems biology, control theory, operations research. I seek novel possibilities how these can be applied to develop quantitative methods for research in the life sciences. I'm also interested in making a positive societal impact with my research, and I'm open to being contacted with interesting project ideas for consultation (currently I work as a freelance applied mathematician).
- I was based at the Centre for Biological Systems Analysis (ZBSA) and tangentially at the Department of Mathematical Stochastics, both at the University of Freiburg, Germany. My host was Prof. Peter Pfaffelhuber.
- In Freiburg, I was most recently an AXA Research Fund postdoctoral fellow.
- I was visiting the Isaac Newton Institute for Mathematical Sciences, Cambridge, UK, from January until June 2016. (Even in this period, the AXA Research Fund fellowship provided my income.)
- I came to Freiburg with a Humboldt Postdoctoral Research Fellowship.
- Before that, I was a postdoctoral researcher at the Department of Mechanical Engineering, University of California, Santa Barbara. I worked with Profs. Mustafa Khammash (Dept. of Mechanical Engineering) and João P. Hespanha (Dept. of Electrical and Computer Engineering).
Sebastian Ohse, Melanie Boerries, Hauke Busch
Blind normalization of public high-throughput databases
PeerJ Computer Science, 5:e231, 2019. External link (open access)
We thank Bence Mélykúti for comments that improved the manuscript. Melanie Boerries
and Hauke Bush are designated equal last authors due to a shared research group at the
time of this work.
Levente Szántó, Yukang Feng, Fan Zhong, Timo Hees, Evelyne van Ruymbeke, Rolf Mülhaupt, Christian Friedrich
Ultra-broad molecular weight distribution effects on viscoelastic properties of linear multimodal PE
Journal of Rheology, 63(5), 773–784, 2019. External link
L.Sz., Y.F., F.Z., T.H., R.M., and C.F. are grateful to BMBF for financial support within the CATEFF project. L.Sz. thanks Dr. B. Mélykúti for the valuable discussions. E.V.R. is chercheur qualifie of the Fonds National de la Recherche Scientifique (FNRS).
Saul C. Leite, Ruth J. Williams
A constrained Langevin approximation for chemical reaction networks
Annals of Applied Probability, 29(3), 1541-1608, 2019. External link
Acknowledgments. We are grateful to Paul Dupuis for permitting us to include elements of a private communication with him, relating to a modification of the uniqueness argument given in . We would also like to thank Bence Melykuti for helpful feedback, as well as an Associate Editor and two anonymous referees for constructive comments and suggestions, on the first version of this paper.
E. Hingant and R. Yvinec
Deterministic and stochastic Becker–Döring equations: past and recent mathematical developments
In: Stochastic processes, multiscale modeling, and numerical methods for computational cellular biology, Ed.: David Holcman, Springer International Publishing, Cham, 2017. External link
In fact, the state space XM is given by all possible partitions of the
integer M, a well-known problem in combinatorics. In particular, one can show the recurrence formula and the asymptotic as M → ∞, Flajolet and Sedgewick (2009, Chap. I.3)1…
1R. Yvinec thanks Bence Melykuti for pointing out this fact.
A scheme for molecular computation of maximum likelihood estimators for log-linear models
In: DNA computing and molecular programming; 22nd International Conference, DNA 22; Munich, Germany, September 4--8, 2016; Proceedings, 3-18, 2016. External link
I thank Nick S. Jones, Anne Shiu, Abhishek Behera, Ezra Miller, Thomas Ouldridge, Gheorghe Craciun, and Bence Melykuti for useful discussions.
Martin Jansen, Peter Pfaffelhuber
Stochastic gene expression with delay
Journal of Theoretical Biology, 364(issue), 355–363, 2015. External link
We thank Bence Melykuti for helpful comments on the manuscript.
J. Goutsias, G. Jenkinson
Markovian dynamics on complex reaction networks
Physics Reports, 529(2), 199–264, 2013. External link
This research was supported in part by the DoD High Performance Computing Modernization Program through the National Defense Science and Engineering Graduate (NDSEG) Fellowship 32 CFR 168a, and in part by the National Science Foundation (NSF) Grants CCF-0849907 and CCF-1217213. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. The authors are grateful to B. Mélykúti for reading the manuscript and for providing helpful suggestions.
Medics subject Playboy magazine to 'peer review'
The Guardian, Monday, 29 Oct 2012, 16.30 GMT. External link (open access)
(Thanks to Bence Mélykúti for bringing this to my attention.)